Mycobacterium sp. Root135

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium sp. Root135 is characterized by the presence of flagella and possesses a single replicon. The official accession number for this strain is LMEZ00000000.1, which can be used for further genetic and genomic analysis. The presence of flagella indicates that Mycobacterium sp. Root135 has the capability for motility, which may influence its ecological interactions and adaptations in various environments. This trait is relatively uncommon among mycobacterial species, as many are known for their non-motile characteristics. The single replicon suggests a streamlined genomic organization, which could be associated with its ecological niche or lifestyle. From an ecological perspective, the motility conferred by flagella could enhance the ability of Mycobacterium sp. Root135 to colonize specific habitats or compete with other microorganisms. It may allow this strain to migrate towards favorable conditions, such as nutrient-rich areas or environments with less competition. Understanding the motility of this strain, along with its genomic characteristics, could provide insights into its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium sp. Root135
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium sp. Root135 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1057539 bp

Thymine Count

1059976 bp

Guanine Count

2185461 bp

Cytosine Count

2198295 bp

Genome Length

6501425 bp

Protein-coding Genes

5995 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1-pyrroline-5-carboxylate dehydrogenaseASD37_27505Not AvailablePositive5924670 - 592631058542.4
proline dehydrogenaseASD37_27510Not AvailablePositive5926314 - 592727635609.2
hypothetical proteinASD37_27515Not AvailableNegative5927279 - 592812730172.2
adp-ribose pyrophosphataseASD37_27520Not AvailableNegative5928124 - 592872622569.4
acyl-coa synthetaseASD37_27525Not AvailablePositive5928763 - 593016948593.3
glyoxalaseASD37_27530Not AvailablePositive5930172 - 593051612621.8
alpha-galactosidaseASD37_27535Not AvailablePositive5930579 - 593182944811.7
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseASD37_27540Not AvailableNegative5931833 - 593278332871.9
succinyl-diaminopimelate desuccinylaseASD37_27545Not AvailablePositive5932855 - 593392237679.5
abc transporterASD37_27550Not AvailablePositive5934035 - 593564257283.4

Displaying genes 5501 – 5510 of 6046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.