Mycobacterium sp. Root135

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium sp. Root135 is characterized by the presence of flagella and possesses a single replicon. The official accession number for this strain is LMEZ00000000.1, which can be used for further genetic and genomic analysis. The presence of flagella indicates that Mycobacterium sp. Root135 has the capability for motility, which may influence its ecological interactions and adaptations in various environments. This trait is relatively uncommon among mycobacterial species, as many are known for their non-motile characteristics. The single replicon suggests a streamlined genomic organization, which could be associated with its ecological niche or lifestyle. From an ecological perspective, the motility conferred by flagella could enhance the ability of Mycobacterium sp. Root135 to colonize specific habitats or compete with other microorganisms. It may allow this strain to migrate towards favorable conditions, such as nutrient-rich areas or environments with less competition. Understanding the motility of this strain, along with its genomic characteristics, could provide insights into its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium sp. Root135
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium sp. Root135 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1057539 bp

Thymine Count

1059976 bp

Guanine Count

2185461 bp

Cytosine Count

2198295 bp

Genome Length

6501425 bp

Protein-coding Genes

5995 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phytoene dehydrogenaseASD37_26490Not AvailablePositive5718153 - 571966153498.1
phytoene synthaseASD37_26495Not AvailablePositive5719658 - 572060535349.9
isorenieratene synthaseASD37_26500Not AvailablePositive5720572 - 572213156148.5
2fe-2s ferredoxinASD37_26505Not AvailablePositive5722128 - 572313536129.1
isopentenyl-diphosphate delta-isomeraseASD37_26510Not AvailableNegative5723212 - 572374819494.1
glyoxalaseASD37_26515Not AvailableNegative5723822 - 572432818922.1
hypothetical proteinASD37_26520Not AvailablePositive5724426 - 57247169764.67
zn-dependent oxidoreductaseASD37_26525Not AvailableNegative5724730 - 572584238758.5
hypothetical proteinASD37_26530Not AvailableNegative5725983 - 572804970395.8
marr family transcriptional regulatorASD37_26535Not AvailablePositive5728102 - 572858417453.6

Displaying genes 5301 – 5310 of 6046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.