Mycobacterium sp. Root135

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium sp. Root135 is characterized by the presence of flagella and possesses a single replicon. The official accession number for this strain is LMEZ00000000.1, which can be used for further genetic and genomic analysis. The presence of flagella indicates that Mycobacterium sp. Root135 has the capability for motility, which may influence its ecological interactions and adaptations in various environments. This trait is relatively uncommon among mycobacterial species, as many are known for their non-motile characteristics. The single replicon suggests a streamlined genomic organization, which could be associated with its ecological niche or lifestyle. From an ecological perspective, the motility conferred by flagella could enhance the ability of Mycobacterium sp. Root135 to colonize specific habitats or compete with other microorganisms. It may allow this strain to migrate towards favorable conditions, such as nutrient-rich areas or environments with less competition. Understanding the motility of this strain, along with its genomic characteristics, could provide insights into its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium sp. Root135
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium sp. Root135 contig_9, whole genome shotgun sequence.

Gene Summary

Adenine Count

1057539 bp

Thymine Count

1059976 bp

Guanine Count

2185461 bp

Cytosine Count

2198295 bp

Genome Length

6501425 bp

Protein-coding Genes

5995 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseASD37_11870Not AvailableNegative2580839 - 258169029707.3
hypothetical proteinASD37_11875Not AvailableNegative2581790 - 258257829135.4
hypothetical proteinASD37_11880Not AvailableNegative2582714 - 25829508756.37
rna polymerase subunit sigma-70ASD37_11885Not AvailablePositive2583034 - 258388230668.2
molybdopterin dinucleotide-binding proteinASD37_11890Not AvailableNegative2583902 - 258611878590.1
formate dehydrogenaseASD37_11895Not AvailableNegative2586191 - 258835677858.2
lysr family transcriptional regulatorASD37_11900Not AvailableNegative2588493 - 258941033715.6
c4-dicarboxylate abc transporterASD37_11905Not AvailablePositive2589606 - 259097647032.9
prpf, acnd-accessoryASD37_11910Not AvailablePositive2591098 - 259222237748.2
hypothetical proteinASD37_11915Not AvailablePositive2592291 - 259276116795.2

Displaying genes 2431 – 2440 of 6046 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.