Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | ASD34_24055 | Not Available | Negative | 1035500 - 1037110 | 57721.7 |
| abc transporter substrate-binding protein | ASD34_24060 | Not Available | Negative | 1037117 - 1038118 | 36062.1 |
| atp-binding protein | ASD34_24065 | Not Available | Negative | 1038165 - 1038989 | 30355.8 |
| abc transporter permease | ASD34_24070 | Not Available | Negative | 1038986 - 1039753 | 27869.2 |
| gntr family transcriptional regulator | ASD34_24075 | Not Available | Positive | 1039840 - 1040595 | 28421.4 |
| mandelate racemase | ASD34_24080 | Not Available | Positive | 1040592 - 1041743 | 40848.1 |
| exodeoxyribonuclease iii | ASD34_24085 | Not Available | Positive | 1041922 - 1042707 | 29726.7 |
| hypothetical protein | ASD34_24090 | Not Available | Positive | 1042713 - 1043246 | 18880.8 |
| nitrogen regulation protein nr(i) | ASD34_24095 | Not Available | Negative | 1043274 - 1044806 | 55293.3 |
| pas domain-containing sensor histidine kinase | ASD34_24100 | Not Available | Negative | 1044833 - 1045912 | 40269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
