Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-coa hydratase | ASD34_00405 | Not Available | Negative | 93539 - 94432 | 31534.1 |
| enoyl-coa hydratase | ASD34_00410 | Not Available | Negative | 94429 - 95244 | 28790.7 |
| hypothetical protein | ASD34_00415 | Not Available | Negative | 95241 - 96290 | 39957.3 |
| aminoglycoside phosphotransferase | ASD34_00420 | Not Available | Negative | 96341 - 97378 | 38345.0 |
| 3-oxoacyl-acp reductase | ASD34_00425 | Not Available | Negative | 97386 - 98159 | 26756.2 |
| acetyl-coa acetyltransferase | ASD34_00430 | Not Available | Positive | 98230 - 99405 | 40544.7 |
| dna-binding protein | ASD34_00435 | Not Available | Positive | 99409 - 99807 | 14410.1 |
| hypothetical protein | ASD34_00440 | Not Available | Positive | 99816 - 100613 | 28874.2 |
| short-chain dehydrogenase | ASD34_00445 | Not Available | Positive | 100610 - 101425 | 29108.1 |
| hypothetical protein | ASD34_00450 | Not Available | Negative | 101448 - 102395 | 32452.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
