Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_23590 | Not Available | Positive | 932237 - 933706 | 46976.4 |
| hypothetical protein | ASD34_23595 | Not Available | Positive | 933739 - 934158 | 15272.1 |
| hypothetical protein | ASD34_23600 | Not Available | Negative | 934159 - 934584 | 15431.3 |
| hypothetical protein | ASD34_23605 | Not Available | Positive | 934626 - 934838 | 7935.7 |
| succinate-semialdehyde dehydrogenase | ASD34_23610 | Not Available | Negative | 934855 - 936294 | 48955.2 |
| short-chain dehydrogenase | ASD34_23620 | Not Available | Negative | 937546 - 938343 | 27588.4 |
| bicyclomycin resistance protein | ASD34_23625 | Not Available | Positive | 938665 - 939888 | 44254.9 |
| abc transporter permease | ASD34_23630 | Not Available | Positive | 939980 - 940870 | 32772.8 |
| hypothetical protein | ASD34_23635 | Not Available | Positive | 940867 - 941721 | 31576.3 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASD34_23640 | Not Available | Negative | 941792 - 942664 | 30831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
