Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspi | ASD34_23340 | Not Available | Positive | 866876 - 867256 | 13436.5 |
| general secretion pathway protein j | ASD34_23345 | Not Available | Positive | 867256 - 867945 | 24593.5 |
| general secretion pathway protein gspk | ASD34_23350 | Not Available | Positive | 867942 - 868976 | 36331.3 |
| general secretion pathway protein gspl | ASD34_23355 | Not Available | Positive | 869107 - 870318 | 43021.9 |
| general secretion pathway protein gspm | ASD34_23360 | Not Available | Positive | 870315 - 870866 | 19434.7 |
| general secretion pathway protein gspn | ASD34_23365 | Not Available | Positive | 870890 - 871693 | 28439.2 |
| type ii secretion system protein gspd | ASD34_23370 | Not Available | Positive | 871701 - 874037 | 81486.1 |
| type ii secretion system protein gspe | ASD34_23375 | Not Available | Positive | 874073 - 875464 | 49916.0 |
| type ii secretion system protein gspf | ASD34_23380 | Not Available | Positive | 875474 - 876715 | 43598.9 |
| 5'-nucleotidase | ASD34_23385 | Not Available | Positive | 876738 - 877637 | 33157.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
