Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ASD34_23290 | Not Available | Negative | 857124 - 858104 | 36001.5 |
| porin | ASD34_23295 | Not Available | Negative | 858289 - 859488 | 42227.3 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ASD34_23300 | Not Available | Positive | 859770 - 860399 | 22483.8 |
| osmotically inducible protein c | ASD34_23305 | Not Available | Negative | 860424 - 860873 | 15802.0 |
| porin | ASD34_23310 | Not Available | Positive | 861146 - 862366 | 42990.2 |
| hypothetical protein | ASD34_23315 | Not Available | Negative | 862462 - 863592 | 42608.4 |
| threonine dehydratase | ASD34_23320 | Not Available | Positive | 863654 - 865231 | 57174.5 |
| hypothetical protein | ASD34_23325 | Not Available | Negative | 865275 - 865907 | 20851.1 |
| type ii secretion system protein gspg | ASD34_23330 | Not Available | Positive | 865958 - 866398 | 16030.3 |
| type ii secretion system protein gsph | ASD34_23335 | Not Available | Positive | 866373 - 866879 | 17527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
