Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | ASD34_23190 | Not Available | Negative | 833904 - 834761 | 32080.4 |
| sugar abc transporter substrate-binding protein | ASD34_23195 | Not Available | Negative | 834820 - 836133 | 47504.0 |
| lysr family transcriptional regulator | ASD34_23200 | Not Available | Negative | 836310 - 837221 | 32816.8 |
| abc transporter substrate-binding protein | ASD34_23205 | Not Available | Positive | 837345 - 838325 | 33808.8 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | ASD34_23210 | Not Available | Positive | 838370 - 839434 | 37453.3 |
| hypothetical protein | ASD34_23215 | Not Available | Negative | 839488 - 839820 | 12281.1 |
| glucose-6-phosphate isomerase | ASD34_23220 | Not Available | Negative | 839994 - 841547 | 56384.1 |
| transaldolase | ASD34_23225 | Not Available | Negative | 841550 - 842506 | 34578.4 |
| lipocalin | ASD34_23230 | Not Available | Positive | 842748 - 843416 | 24189.8 |
| haloacid dehalogenase | ASD34_23235 | Not Available | Negative | 843362 - 844024 | 24545.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
