Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ASD34_23040 | Not Available | Positive | 801607 - 802587 | 34305.0 |
| lysr family transcriptional regulator | ASD34_23045 | Not Available | Negative | 802603 - 803445 | 31383.1 |
| carnitine dehydratase | ASD34_23050 | Not Available | Positive | 803566 - 804783 | 42299.9 |
| enoyl-coa hydratase | ASD34_23055 | Not Available | Positive | 804837 - 805694 | 29862.8 |
| acyl-coa dehydrogenase | ASD34_23060 | Not Available | Positive | 805719 - 806900 | 43357.3 |
| carnitine dehydratase | ASD34_23065 | Not Available | Positive | 806924 - 808117 | 42381.7 |
| acetyl-coa acetyltransferase | ASD34_23070 | Not Available | Positive | 808114 - 809295 | 41225.6 |
| hydroxyquinol 1,2-dioxygenase | ASD34_23075 | Not Available | Negative | 809629 - 810492 | 31097.9 |
| abc transporter permease | ASD34_23080 | Not Available | Negative | 810476 - 811519 | 37358.9 |
| hypothetical protein | ASD34_23085 | Not Available | Negative | 811525 - 812502 | 33958.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
