Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretin | ASD34_22885 | Not Available | Negative | 761189 - 763336 | 75882.7 |
| pilus assembly protein pilp | ASD34_22890 | Not Available | Negative | 763333 - 763875 | 20216.4 |
| pilus assembly protein pilo | ASD34_22895 | Not Available | Negative | 763872 - 764552 | 25299.4 |
| fimbrial protein | ASD34_22900 | Not Available | Negative | 764559 - 765179 | 22949.8 |
| pilus assembly protein pilm | ASD34_22905 | Not Available | Negative | 765176 - 766255 | 38959.7 |
| penicillin-binding protein | ASD34_22910 | Not Available | Positive | 766590 - 768917 | 84347.8 |
| iron donor protein cyay | ASD34_22915 | Not Available | Negative | 768953 - 769285 | 12173.3 |
| diaminopimelate decarboxylase | ASD34_22920 | Not Available | Positive | 769543 - 770820 | 45520.7 |
| sulfite oxidase | ASD34_22925 | Not Available | Negative | 770828 - 771481 | 24548.0 |
| sulfoxide reductase catalytic subunit yedy | ASD34_22930 | Not Available | Negative | 771513 - 772526 | 37457.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
