Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-3-methylglutaryl coa synthase | ASD34_00300 | Not Available | Negative | 70200 - 71675 | 53423.2 |
| esterase | ASD34_00305 | Not Available | Negative | 71678 - 72616 | 33463.9 |
| 3-oxoacyl-acp reductase | ASD34_00310 | Not Available | Negative | 72613 - 73341 | 24572.6 |
| enoyl-coa hydratase | ASD34_00315 | Not Available | Negative | 73338 - 74135 | 27562.9 |
| ring-hydroxylating dioxygenase subunit beta | ASD34_00320 | Not Available | Negative | 74229 - 74714 | 18714.1 |
| ring-hydroxylating oxygenase subunit alpha | ASD34_00325 | Not Available | Negative | 74717 - 76006 | 48314.2 |
| (2fe-2s)-binding protein | ASD34_00330 | Not Available | Positive | 76183 - 76503 | 11437.8 |
| abc transporter substrate-binding protein | ASD34_00335 | Not Available | Positive | 76803 - 77771 | 34144.6 |
| 3-oxosteroid 1-dehydrogenase | ASD34_00340 | Not Available | Positive | 77835 - 79553 | 61309.5 |
| nipsnap family containing protein | ASD34_00345 | Not Available | Positive | 79580 - 79921 | 12814.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
