Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-hexose-6-phosphate mutarotase | ASD34_22735 | Not Available | Negative | 731146 - 731979 | 30229.0 |
| c4-dicarboxylate abc transporter | ASD34_22740 | Not Available | Positive | 732113 - 733420 | 46595.6 |
| amino acid abc transporter substrate-binding protein | ASD34_22745 | Not Available | Positive | 733432 - 734334 | 32926.8 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | ASD34_22750 | Not Available | Negative | 734517 - 735260 | 26018.2 |
| imidazole glycerol phosphate synthase subunit hish | ASD34_22755 | Not Available | Negative | 735324 - 735983 | 23904.4 |
| imidazoleglycerol-phosphate dehydratase | ASD34_22760 | Not Available | Negative | 736003 - 736620 | 22130.4 |
| histidinol-phosphate aminotransferase | ASD34_22765 | Not Available | Negative | 736617 - 737720 | 39466.1 |
| hypothetical protein | ASD34_22770 | Not Available | Negative | 737717 - 738097 | 13789.7 |
| hypothetical protein | ASD34_22775 | Not Available | Negative | 738108 - 738935 | 29911.2 |
| histidinol dehydrogenase | ASD34_22780 | Not Available | Negative | 738973 - 740295 | 46770.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
