Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter permease | ASD34_22685 | Not Available | Negative | 724139 - 725500 | 48497.1 |
| 2-alkenal reductase | ASD34_22690 | Not Available | Positive | 725792 - 726949 | 40204.2 |
| twin-arginine protein translocation system subunit tatc | ASD34_22695 | Not Available | Negative | 727067 - 727885 | 29569.9 |
| preprotein translocase | ASD34_22700 | Not Available | Negative | 727959 - 728420 | 16967.4 |
| preprotein translocase subunit tata | ASD34_22705 | Not Available | Negative | 728440 - 728688 | 8647.45 |
| hit family hydrolase | ASD34_22710 | Not Available | Negative | 728754 - 729113 | 13176.0 |
| hypothetical protein | ASD34_22715 | Not Available | Negative | 729103 - 729492 | 14692.2 |
| phosphoribosyl-atp pyrophosphatase | ASD34_22720 | Not Available | Negative | 729518 - 729910 | 13997.4 |
| phosphoribosyl-amp cyclohydrolase | ASD34_22725 | Not Available | Negative | 729907 - 730296 | 14849.6 |
| imidazole glycerol phosphate synthase subunit hisf | ASD34_22730 | Not Available | Negative | 730338 - 731123 | 27285.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
