Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ASD34_22375 | Not Available | Positive | 650742 - 651716 | 34013.2 |
| abc transporter substrate-binding protein | ASD34_22380 | Not Available | Positive | 651728 - 652741 | 34676.9 |
| 4-hydroxy-2-oxovalerate aldolase | ASD34_22385 | Not Available | Positive | 652738 - 653544 | 28476.0 |
| iclr family transcriptional regulator | ASD34_22395 | Not Available | Negative | 654440 - 655243 | 29267.5 |
| laci family transcriptional regulator | ASD34_22400 | Not Available | Positive | 655449 - 656432 | 34112.1 |
| enoyl-coa hydratase | ASD34_22405 | Not Available | Positive | 656470 - 657267 | 28299.0 |
| 6-carboxyhexanoate--coa ligase | ASD34_22410 | Not Available | Positive | 657273 - 659375 | 72397.5 |
| hypothetical protein | ASD34_22415 | Not Available | Positive | 659634 - 660521 | 30651.1 |
| 3-oxoadipate enol-lactonase | ASD34_22420 | Not Available | Positive | 660534 - 661361 | 29759.7 |
| laci family transcriptional regulator | ASD34_22425 | Not Available | Positive | 661373 - 662329 | 32835.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
