Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein abc transporter atp-binding protein | ASD34_22060 | Not Available | Negative | 581393 - 582070 | 24010.1 |
| cell division protein ftsx | ASD34_22065 | Not Available | Negative | 582063 - 583319 | 45570.2 |
| hypothetical protein | ASD34_22070 | Not Available | Positive | 583443 - 584411 | 34337.7 |
| single-stranded-dna-specific exonuclease recj | ASD34_22075 | Not Available | Positive | 584408 - 586129 | 61578.4 |
| hypothetical protein | ASD34_22080 | Not Available | Positive | 586180 - 586773 | 22675.8 |
| short-chain dehydrogenase | ASD34_22085 | Not Available | Positive | 586906 - 587925 | 35870.7 |
| amp-dependent synthetase | ASD34_22090 | Not Available | Negative | 588081 - 589697 | 59270.3 |
| pimeloyl-coa dehydrogenase large subunit | ASD34_22095 | Not Available | Negative | 589717 - 590922 | 44979.9 |
| hypothetical protein | ASD34_22100 | Not Available | Negative | 590935 - 592068 | 40908.7 |
| abc transporter atp-binding protein | ASD34_22105 | Not Available | Negative | 592114 - 592818 | 25676.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
