Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_21710 | Not Available | Negative | 5670233 - 5671021 | 28880.3 |
| histidine kinase | ASD34_21715 | Not Available | Negative | 5671028 - 5672965 | 68147.3 |
| abc transporter substrate-binding protein | ASD34_21720 | Not Available | Negative | 5673019 - 5673960 | 32137.6 |
| histidine kinase | ASD34_21725 | Not Available | Negative | 5674232 - 5676151 | 68694.0 |
| phosphonate abc transporter substrate-binding protein | ASD34_21730 | Not Available | Positive | 5676313 - 5677365 | 38633.7 |
| phosphonate abc transporter substrate-binding protein | ASD34_21735 | Not Available | Positive | 5677386 - 5678399 | 37109.6 |
| type vi secretion protein | ASD34_21740 | Not Available | Positive | 5678594 - 5679925 | 49276.5 |
| hypothetical protein | ASD34_21745 | Not Available | Positive | 5679958 - 5681307 | 47943.6 |
| type vi secretion protein | ASD34_21750 | Not Available | Positive | 5681304 - 5684909 | 132650.0 |
| type vi secretion protein | ASD34_21755 | Not Available | Positive | 5684906 - 5685544 | 22941.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
