Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ASD34_21610 | Not Available | Positive | 5640180 - 5641655 | 49749.5 |
| monooxygenase | ASD34_21615 | Not Available | Negative | 5641652 - 5643364 | 63183.4 |
| abc transporter substrate-binding protein | ASD34_21620 | Not Available | Negative | 5643384 - 5644370 | 33835.2 |
| lysr family transcriptional regulator | ASD34_21625 | Not Available | Positive | 5644494 - 5645390 | 32567.9 |
| thiamine monophosphate kinase | ASD34_21630 | Not Available | Negative | 5645407 - 5646363 | 32611.9 |
| isochorismatase | ASD34_21635 | Not Available | Negative | 5646532 - 5647161 | 22714.9 |
| arac family transcriptional regulator | ASD34_21640 | Not Available | Positive | 5647264 - 5648253 | 35899.2 |
| gamma-glutamyl ligase | ASD34_21645 | Not Available | Negative | 5648264 - 5649484 | 45952.5 |
| sodium:proton exchanger | ASD34_21650 | Not Available | Negative | 5649481 - 5650752 | 44310.4 |
| recombinase | ASD34_21655 | Not Available | Negative | 5650749 - 5652722 | 71182.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
