Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide transporter | ASD34_21210 | Not Available | Positive | 5550994 - 5551902 | 31718.6 |
| peptide abc transporter atp-binding protein | ASD34_21215 | Not Available | Positive | 5551920 - 5552945 | 36987.4 |
| peptide abc transporter atp-binding protein | ASD34_21220 | Not Available | Positive | 5552942 - 5553964 | 37174.2 |
| peptide abc transporter substrate-binding protein | ASD34_21225 | Not Available | Positive | 5554004 - 5555635 | 60761.7 |
| s-adenosylhomocysteine nucleosidase | ASD34_21230 | Not Available | Positive | 5555764 - 5556534 | 27069.6 |
| hypothetical protein | ASD34_21235 | Not Available | Negative | 5556544 - 5557296 | 26609.4 |
| magnesium transporter cora | ASD34_21240 | Not Available | Negative | 5557353 - 5558339 | 37880.4 |
| atp-dependent dna helicase | ASD34_21245 | Not Available | Positive | 5558565 - 5560682 | 77716.0 |
| ribosome hibernation promoting factor | ASD34_21250 | Not Available | Positive | 5561001 - 5561330 | 12729.3 |
| pts sugar transporter subunit iia | ASD34_21255 | Not Available | Positive | 5561523 - 5561990 | 16377.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
