Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate--coa ligase pima | ASD34_21160 | Not Available | Negative | 5540110 - 5541828 | 62224.0 |
| pp_05124 | ASD34_21165 | Not Available | Positive | 5541974 - 5543074 | Not Available |
| nudix hydrolase | ASD34_21170 | Not Available | Negative | 5543088 - 5543561 | 17526.8 |
| two-component system response regulator | ASD34_21175 | Not Available | Negative | 5543627 - 5544340 | 27008.8 |
| nadp transhydrogenase subunit alpha | ASD34_21180 | Not Available | Positive | 5544743 - 5545885 | 38839.1 |
| aspartate decarboxylase | ASD34_21185 | Not Available | Positive | 5545903 - 5546265 | 13232.8 |
| nad(p) transhydrogenase | ASD34_21190 | Not Available | Positive | 5546317 - 5546655 | 11747.9 |
| nad synthetase | ASD34_21195 | Not Available | Positive | 5546652 - 5548151 | 52013.5 |
| long-chain fatty acid--coa ligase | ASD34_21200 | Not Available | Positive | 5548251 - 5549930 | 60684.7 |
| peptide abc transporter permease | ASD34_21205 | Not Available | Positive | 5549985 - 5550989 | 36557.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
