Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_20960 | Not Available | Positive | 5492879 - 5493598 | 26110.4 |
| acyl-coa thioesterase ii | ASD34_20965 | Not Available | Positive | 5493693 - 5494592 | 33129.7 |
| gntr family transcriptional regulator | ASD34_20970 | Not Available | Negative | 5494567 - 5495286 | 26710.2 |
| short-chain dehydrogenase | ASD34_20975 | Not Available | Positive | 5495432 - 5496211 | 26879.1 |
| receptor | ASD34_20980 | Not Available | Positive | 5496259 - 5497473 | 43321.4 |
| abc transporter permease | ASD34_20985 | Not Available | Positive | 5497493 - 5498395 | 31414.9 |
| abc transporter permease | ASD34_20990 | Not Available | Positive | 5498392 - 5499384 | 35085.5 |
| abc transporter atp-binding protein | ASD34_20995 | Not Available | Positive | 5499381 - 5500145 | 27612.5 |
| abc transporter atp-binding protein | ASD34_21000 | Not Available | Positive | 5500138 - 5500857 | 26338.0 |
| 3-oxoacyl-acp reductase | ASD34_21005 | Not Available | Positive | 5500889 - 5501638 | 25919.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
