Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ASD34_20910 | Not Available | Negative | 5483213 - 5483923 | 26931.2 |
| poly(hydroxyalkanoate) granule-associated protein | ASD34_20915 | Not Available | Negative | 5484051 - 5484545 | 17422.6 |
| acyl-coa thioesterase | ASD34_20920 | Not Available | Negative | 5484633 - 5485082 | 15952.3 |
| lysr family transcriptional regulator | ASD34_20925 | Not Available | Negative | 5485158 - 5486054 | 33077.9 |
| gentisate 1,2-dioxygenase | ASD34_20930 | Not Available | Positive | 5486186 - 5487268 | 39714.1 |
| fumarylacetoacetate hydrolase | ASD34_20935 | Not Available | Positive | 5487339 - 5488043 | 25373.4 |
| salicylate hydroxylase | ASD34_20940 | Not Available | Positive | 5488060 - 5489256 | 43470.9 |
| tctc | ASD34_20945 | Not Available | Positive | 5489444 - 5490424 | 34868.8 |
| receptor | ASD34_20950 | Not Available | Positive | 5490510 - 5491487 | 34060.5 |
| hypothetical protein | ASD34_20955 | Not Available | Positive | 5491487 - 5492848 | 47991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
