Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_20710 | Not Available | Negative | 5438301 - 5438984 | 24187.8 |
| mammalian cell entry protein | ASD34_20715 | Not Available | Negative | 5439007 - 5439963 | 33495.7 |
| abc transporter atp-binding protein | ASD34_20720 | Not Available | Negative | 5439970 - 5440827 | 30489.0 |
| abc transporter permease | ASD34_20725 | Not Available | Negative | 5440824 - 5441996 | 41566.0 |
| lysr family transcriptional regulator | ASD34_20730 | Not Available | Negative | 5442127 - 5443035 | 32579.6 |
| methylmalonate-semialdehyde dehydrogenase | ASD34_20735 | Not Available | Positive | 5443128 - 5444639 | 53899.0 |
| choline dehydrogenase | ASD34_20740 | Not Available | Positive | 5444800 - 5446434 | 59815.8 |
| nuclease | ASD34_20745 | Not Available | Negative | 5446480 - 5446755 | 10404.7 |
| aldehyde dehydrogenase | ASD34_20750 | Not Available | Positive | 5446943 - 5448481 | 54374.4 |
| abc transporter substrate-binding protein | ASD34_20755 | Not Available | Positive | 5448648 - 5449556 | 32467.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
