Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | ASD34_20660 | Not Available | Positive | 5427514 - 5429514 | 72476.6 |
| fumarylacetoacetase | ASD34_20665 | Not Available | Negative | 5429567 - 5430835 | 45027.6 |
| abc transporter substrate-binding protein | ASD34_20670 | Not Available | Negative | 5430862 - 5431842 | 33612.9 |
| homogentisate 1,2-dioxygenase | ASD34_20675 | Not Available | Negative | 5431845 - 5433155 | 48051.8 |
| hypothetical protein | ASD34_20680 | Not Available | Negative | 5433210 - 5433404 | 6959.2 |
| fad-dependent oxidoreductase | ASD34_20685 | Not Available | Negative | 5433410 - 5435047 | 60003.9 |
| mbl fold metallo-hydrolase | ASD34_20690 | Not Available | Negative | 5435112 - 5436071 | 35326.9 |
| iclr family transcriptional regulator | ASD34_20695 | Not Available | Positive | 5436220 - 5437095 | 30725.9 |
| iron dicitrate transport regulator fecr | ASD34_20700 | Not Available | Positive | 5437092 - 5437874 | 27697.4 |
| hypothetical protein | ASD34_20705 | Not Available | Negative | 5438028 - 5438249 | 7385.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
