Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASD34_20610 | Not Available | Positive | 5417776 - 5418675 | 32535.8 |
| exodeoxyribonuclease iii | ASD34_20615 | Not Available | Negative | 5419103 - 5419906 | 30191.8 |
| orotate phosphoribosyltransferase | ASD34_20620 | Not Available | Positive | 5419919 - 5420599 | 23970.5 |
| hypothetical protein | ASD34_20625 | Not Available | Positive | 5420612 - 5421304 | 25954.6 |
| glutamyl-trna amidotransferase | ASD34_20630 | Not Available | Negative | 5421348 - 5422838 | 53890.1 |
| glutamyl-trna amidotransferase | ASD34_20635 | Not Available | Negative | 5422840 - 5424330 | 52453.1 |
| glutamyl-trna amidotransferase | ASD34_20640 | Not Available | Negative | 5424330 - 5424629 | 10798.9 |
| rod shape-determining protein mreb | ASD34_20645 | Not Available | Positive | 5424846 - 5425889 | 36847.0 |
| rod shape-determining protein mrec | ASD34_20650 | Not Available | Positive | 5425976 - 5426938 | 34241.4 |
| rod shape-determining protein mred | ASD34_20655 | Not Available | Positive | 5426935 - 5427456 | 19175.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
