Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | ASD34_00200 | Not Available | Positive | 46623 - 48176 | 56724.8 |
| permease | ASD34_00205 | Not Available | Negative | 48246 - 49121 | 30504.8 |
| hypothetical protein | ASD34_00210 | Not Available | Negative | 49369 - 50529 | 41534.3 |
| branched-chain amino acid abc transporter permease | ASD34_00215 | Not Available | Negative | 50581 - 51627 | 37082.0 |
| abc transporter permease | ASD34_00220 | Not Available | Negative | 51627 - 52499 | 29963.0 |
| amp-dependent synthetase | ASD34_00225 | Not Available | Negative | 52496 - 54358 | 69169.0 |
| abc transporter atp-binding protein | ASD34_00230 | Not Available | Negative | 54351 - 55142 | 28805.0 |
| abc transporter atp-binding protein | ASD34_00235 | Not Available | Negative | 55139 - 55969 | 29817.3 |
| acyl-coa thioesterase ii | ASD34_00240 | Not Available | Negative | 56176 - 57048 | 32298.3 |
| hypothetical protein | ASD34_00245 | Not Available | Negative | 57054 - 57806 | 28335.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
