Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyglucarate aldolase | ASD34_20460 | Not Available | Negative | 5388467 - 5389288 | 28710.5 |
| 2-oxo-hepta-3-ene-1,7-dioate hydratase | ASD34_20465 | Not Available | Negative | 5389301 - 5390104 | 29089.9 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | ASD34_20470 | Not Available | Negative | 5390121 - 5390528 | 14838.7 |
| extradiol ring-cleavage dioxygenase | ASD34_20475 | Not Available | Negative | 5390542 - 5391369 | 30282.1 |
| aromatic ring-opening dioxygenase liga | ASD34_20480 | Not Available | Negative | 5391455 - 5391790 | 12165.7 |
| laci family transcriptional regulator | ASD34_20485 | Not Available | Negative | 5391794 - 5392768 | 33807.9 |
| 2-hydroxymuconic semialdehyde dehydrogenase | ASD34_20490 | Not Available | Negative | 5392765 - 5394231 | 52473.9 |
| abc transporter substrate-binding protein | ASD34_20495 | Not Available | Negative | 5394269 - 5395270 | 35132.4 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASD34_20500 | Not Available | Negative | 5395312 - 5396082 | 28373.9 |
| fumarylacetoacetate hydrolase | ASD34_20505 | Not Available | Negative | 5396079 - 5396711 | 22291.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
