Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease | ASD34_20360 | Not Available | Negative | 5366097 - 5367635 | 53879.6 |
| hypothetical protein | ASD34_20365 | Not Available | Positive | 5367853 - 5368719 | 30583.9 |
| transcriptional regulator | ASD34_20370 | Not Available | Positive | 5368790 - 5369128 | 12288.0 |
| ammonia channel protein | ASD34_20375 | Not Available | Positive | 5369158 - 5370582 | 47996.8 |
| gluconolactonase | ASD34_20380 | Not Available | Positive | 5370828 - 5371757 | 33741.9 |
| lysr family transcriptional regulator | ASD34_20385 | Not Available | Positive | 5371777 - 5372664 | 32491.0 |
| lactate permease | ASD34_20390 | Not Available | Positive | 5372791 - 5374452 | 59290.0 |
| glycolate oxidase subunit glcd | ASD34_20395 | Not Available | Positive | 5374467 - 5375969 | 53276.2 |
| glycolate oxidase | ASD34_20400 | Not Available | Positive | 5375986 - 5377101 | 38681.3 |
| glycolate oxidase iron-sulfur subunit | ASD34_20405 | Not Available | Positive | 5377124 - 5378362 | 44735.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
