Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | ASD34_20310 | Not Available | Positive | 5352537 - 5352917 | 13573.0 |
| serine/threonine protein phosphatase | ASD34_20315 | Not Available | Negative | 5352930 - 5353724 | 28499.2 |
| hypothetical protein | ASD34_20320 | Not Available | Negative | 5353717 - 5355636 | 66675.1 |
| hypothetical protein | ASD34_20325 | Not Available | Negative | 5355701 - 5356111 | 14830.7 |
| type vi secretion protein | ASD34_20330 | Not Available | Positive | 5356246 - 5356761 | 18871.8 |
| type vi secretion protein | ASD34_20335 | Not Available | Positive | 5356924 - 5358300 | 50663.9 |
| hypothetical protein | ASD34_20340 | Not Available | Positive | 5358309 - 5359688 | 49454.2 |
| hypothetical protein | ASD34_20345 | Not Available | Positive | 5359688 - 5363323 | 134627.0 |
| type vi secretion system protein impm | ASD34_20350 | Not Available | Positive | 5363351 - 5364082 | 26428.0 |
| serine/threonine protein kinase | ASD34_20355 | Not Available | Positive | 5364119 - 5366071 | 68822.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
