Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | ASD34_20155 | Not Available | Positive | 5314476 - 5315450 | 35044.4 |
| polysaccharide synthesis protein gtra | ASD34_20160 | Not Available | Positive | 5315458 - 5315871 | 14733.0 |
| enamidase | ASD34_20165 | Not Available | Negative | 5315900 - 5317099 | 41437.4 |
| tetr family transcriptional regulator | ASD34_20170 | Not Available | Negative | 5317045 - 5317815 | 28770.9 |
| ferredoxin-nadp reductase | ASD34_20175 | Not Available | Negative | 5317916 - 5318689 | 29208.2 |
| 6-hydroxynicotinate reductase | ASD34_20180 | Not Available | Positive | 5319008 - 5320627 | 57366.9 |
| thiamine biosynthesis protein apbe | ASD34_20185 | Not Available | Positive | 5320632 - 5321534 | 32016.9 |
| hypothetical protein | ASD34_20190 | Not Available | Positive | 5321556 - 5322197 | 22800.7 |
| peptide synthetase | ASD34_20195 | Not Available | Positive | 5322236 - 5322820 | 20343.6 |
| abc transporter substrate-binding protein | ASD34_20200 | Not Available | Positive | 5322889 - 5324094 | 43726.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
