Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | ASD34_02450 | Not Available | Negative | 517092 - 518363 | 46767.1 |
| peptidase m48 | ASD34_02455 | Not Available | Negative | 518407 - 520260 | 70497.1 |
| hypothetical protein | ASD34_02460 | Not Available | Positive | 520317 - 520565 | 9547.34 |
| peptidase inhibitor i78 | ASD34_02465 | Not Available | Negative | 520553 - 520882 | 10984.4 |
| phosphoribosylglycinamide formyltransferase | ASD34_02470 | Not Available | Negative | 520921 - 521517 | 20819.2 |
| pimeloyl-coa dehydrogenase large subunit | ASD34_02475 | Not Available | Positive | 521690 - 522871 | 43768.5 |
| acyl-coa dehydrogenase | ASD34_02480 | Not Available | Positive | 522884 - 524011 | 40378.9 |
| twin-arginine translocation pathway signal | ASD34_02485 | Not Available | Positive | 524108 - 525466 | 47684.1 |
| enoyl-coa hydratase | ASD34_02490 | Not Available | Positive | 525473 - 526258 | 27311.2 |
| restriction endonuclease | ASD34_02495 | Not Available | Negative | 526293 - 526853 | 21047.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
