Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | ASD34_19785 | Not Available | Positive | 5229755 - 5230033 | 9826.71 |
| beta-ketoacyl synthase | ASD34_19790 | Not Available | Positive | 5230030 - 5231118 | 37108.4 |
| hypothetical protein | ASD34_19795 | Not Available | Positive | 5231115 - 5231630 | 18794.9 |
| n-methyl-d-aspartate receptor nmdar2c subunit | ASD34_19800 | Not Available | Negative | 5231609 - 5232229 | 23485.7 |
| lytic transglycosylase | ASD34_19805 | Not Available | Negative | 5232244 - 5233350 | 39772.5 |
| transglutaminase | ASD34_19810 | Not Available | Negative | 5233434 - 5235476 | 74651.5 |
| aaa family atpase | ASD34_19820 | Not Available | Negative | 5236399 - 5237319 | 32881.9 |
| deacetylase | ASD34_19825 | Not Available | Positive | 5237409 - 5238362 | 34955.6 |
| mechanosensitive ion channel protein | ASD34_19830 | Not Available | Positive | 5238402 - 5239691 | 46550.6 |
| acyl-coa dehydrogenase | ASD34_19845 | Not Available | Positive | 5241271 - 5243061 | 63615.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
