Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein comec | ASD34_19685 | Not Available | Positive | 5206134 - 5208602 | 88924.0 |
| hypothetical protein | ASD34_19690 | Not Available | Positive | 5208704 - 5210200 | 55692.9 |
| hypothetical protein | ASD34_19695 | Not Available | Positive | 5210212 - 5211168 | 36523.1 |
| sulfatase | ASD34_19700 | Not Available | Negative | 5211369 - 5213000 | 60583.0 |
| peptide-binding protein | ASD34_19705 | Not Available | Positive | 5213200 - 5213664 | 17552.5 |
| glycerol kinase | ASD34_19710 | Not Available | Negative | 5213785 - 5215281 | 53546.0 |
| deor family transcriptional regulator | ASD34_19715 | Not Available | Negative | 5215301 - 5216071 | 27856.6 |
| glycerol-3-phosphate dehydrogenase | ASD34_19720 | Not Available | Positive | 5216194 - 5217870 | 61339.8 |
| abc transporter | ASD34_19725 | Not Available | Positive | 5217870 - 5218943 | 37696.6 |
| abc transporter atp-binding protein | ASD34_19730 | Not Available | Positive | 5218945 - 5220015 | 38799.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
