Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ASD34_19630 | Not Available | Positive | 5192202 - 5192849 | 22765.8 |
| hypothetical protein | ASD34_19635 | Not Available | Negative | 5192846 - 5194591 | 62670.5 |
| hypothetical protein | ASD34_19645 | Not Available | Positive | 5195549 - 5196301 | 27274.4 |
| hypothetical protein | ASD34_19650 | Not Available | Positive | 5196298 - 5196990 | 24596.4 |
| hypothetical protein | ASD34_19655 | Not Available | Positive | 5196966 - 5197301 | 12156.5 |
| hypothetical protein | ASD34_19660 | Not Available | Negative | 5197358 - 5197816 | 15758.2 |
| transglutaminase | ASD34_19665 | Not Available | Negative | 5197813 - 5198799 | 36040.1 |
| abc transporter substrate-binding protein | ASD34_19670 | Not Available | Negative | 5198816 - 5199637 | 28593.2 |
| a circularly permuted atpgrasp family protein | ASD34_19675 | Not Available | Negative | 5199679 - 5202423 | 99064.7 |
| imp dehydrogenase | ASD34_19680 | Not Available | Negative | 5202482 - 5206012 | 131201.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
