Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase | ASD34_19580 | Not Available | Positive | 5182897 - 5183433 | 19243.9 |
| hypothetical protein | ASD34_19585 | Not Available | Negative | 5183527 - 5185206 | 63197.4 |
| abc transporter permease | ASD34_19590 | Not Available | Positive | 5185366 - 5186037 | 24841.9 |
| amino acid abc transporter permease | ASD34_19595 | Not Available | Positive | 5186065 - 5186718 | 23538.6 |
| abc transporter substrate-binding protein | ASD34_19600 | Not Available | Positive | 5186783 - 5187580 | 28274.2 |
| glutamine abc transporter atp-binding protein | ASD34_19605 | Not Available | Positive | 5187613 - 5188368 | 27851.1 |
| glutamine abc transporter atp-binding protein | ASD34_19610 | Not Available | Positive | 5188368 - 5189111 | 26283.7 |
| 2-dehydro-3-deoxygluconokinase | ASD34_19615 | Not Available | Positive | 5189124 - 5190077 | 33632.0 |
| d-glycerate dehydrogenase | ASD34_19620 | Not Available | Positive | 5190082 - 5191062 | 34640.8 |
| dehydrogenase | ASD34_19625 | Not Available | Positive | 5191064 - 5192086 | 36248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
