Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | ASD34_18875 | Not Available | Positive | 5048565 - 5049728 | 40520.0 |
| 3-isopropylmalate dehydrogenase | ASD34_18880 | Not Available | Negative | 5049918 - 5050781 | 32225.7 |
| elongation factor p | ASD34_18885 | Not Available | Negative | 5050909 - 5051463 | 20676.8 |
| hypothetical protein | ASD34_18890 | Not Available | Negative | 5051617 - 5052717 | 40757.6 |
| gamma-glutamyltransferase | ASD34_18900 | Not Available | Negative | 5054322 - 5056373 | 70255.1 |
| excinuclease abc subunit c | ASD34_18905 | Not Available | Positive | 5056525 - 5058498 | 72391.9 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | ASD34_18910 | Not Available | Positive | 5058556 - 5059122 | 21179.7 |
| peptide abc transporter atp-binding protein | ASD34_18915 | Not Available | Positive | 5059119 - 5060006 | 31058.9 |
| lysr family transcriptional regulator | ASD34_18920 | Not Available | Negative | 5060024 - 5060971 | 34797.8 |
| alpha/beta hydrolase | ASD34_18925 | Not Available | Positive | 5061057 - 5061968 | 33155.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
