Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | ASD34_18825 | Not Available | Negative | 5039488 - 5040246 | 25790.4 |
| phasin (pha-granule associated protein) | ASD34_18830 | Not Available | Negative | 5040377 - 5040928 | 18895.2 |
| deacetylase | ASD34_18835 | Not Available | Positive | 5041113 - 5042039 | 34124.5 |
| thioesterase | ASD34_18840 | Not Available | Positive | 5042036 - 5042497 | 16729.7 |
| hypothetical protein | ASD34_18845 | Not Available | Negative | 5042559 - 5042948 | 14083.7 |
| general stress protein csbd | ASD34_18850 | Not Available | Negative | 5043021 - 5043254 | 9150.63 |
| nicotinate phosphoribosyltransferase | ASD34_18855 | Not Available | Positive | 5043440 - 5044660 | 46554.3 |
| sodium:proton antiporter | ASD34_18860 | Not Available | Positive | 5044710 - 5046122 | 50078.3 |
| d-glycerate dehydrogenase | ASD34_18865 | Not Available | Positive | 5046157 - 5047149 | 35144.3 |
| recombinase rmuc | ASD34_18870 | Not Available | Positive | 5047192 - 5048568 | 50598.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
