Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASD34_18775 | Not Available | Negative | 5026781 - 5027698 | 33325.2 |
| 3-hydroxy-3-methylglutaryl-coa lyase | ASD34_18780 | Not Available | Positive | 5027798 - 5028745 | 33360.4 |
| coa-transferase | ASD34_18785 | Not Available | Positive | 5028742 - 5029941 | 42943.9 |
| abc transporter substrate-binding protein | ASD34_18790 | Not Available | Positive | 5029976 - 5030962 | 34022.5 |
| molecular chaperone | ASD34_18795 | Not Available | Negative | 5030985 - 5031305 | 10995.0 |
| hypothetical protein | ASD34_18800 | Not Available | Negative | 5031343 - 5032473 | 40936.8 |
| multidrug transporter cfla | ASD34_18805 | Not Available | Negative | 5032487 - 5033725 | 44821.8 |
| rna polymerase subunit sigma | ASD34_18810 | Not Available | Negative | 5033835 - 5036195 | 87054.3 |
| dna primase | ASD34_18815 | Not Available | Negative | 5036491 - 5038518 | 73995.6 |
| ribonuclease r | ASD34_18820 | Not Available | Positive | 5038593 - 5039540 | 34483.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
