Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | ASD34_18720 | Not Available | Negative | 5016051 - 5017172 | 41900.9 |
| rieske (2fe-2s) protein | ASD34_18725 | Not Available | Positive | 5017318 - 5018427 | 41604.3 |
| diguanylate cyclase | ASD34_18735 | Not Available | Positive | 5019237 - 5020226 | 35184.3 |
| abc transporter substrate-binding protein | ASD34_18740 | Not Available | Positive | 5020382 - 5021569 | 42205.1 |
| abc transporter permease | ASD34_18745 | Not Available | Positive | 5021711 - 5022583 | 30926.2 |
| abc transporter permease | ASD34_18750 | Not Available | Positive | 5022585 - 5023580 | 35340.4 |
| abc transporter atp-binding protein | ASD34_18755 | Not Available | Positive | 5023577 - 5024338 | 27495.6 |
| abc transporter atp-binding protein | ASD34_18760 | Not Available | Positive | 5024331 - 5025038 | 25331.8 |
| protein-disulfide isomerase | ASD34_18765 | Not Available | Negative | 5025049 - 5025774 | 25341.1 |
| mbl fold metallo-hydrolase | ASD34_18770 | Not Available | Negative | 5025762 - 5026661 | 31971.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
