Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | ASD34_18620 | Not Available | Negative | 4993271 - 4994032 | 26535.8 |
| galactarate dehydratase | ASD34_18625 | Not Available | Negative | 4994051 - 4995622 | 55732.2 |
| hypothetical protein | ASD34_18630 | Not Available | Negative | 4995645 - 4996940 | 45201.1 |
| c4-dicarboxylate abc transporter permease | ASD34_18635 | Not Available | Negative | 4996949 - 4997437 | 18042.6 |
| c4-dicarboxylate abc transporter | ASD34_18640 | Not Available | Negative | 4997577 - 4998554 | 36033.6 |
| gluconolactonase | ASD34_18645 | Not Available | Negative | 4998597 - 4999487 | 31497.4 |
| nad-dependent dehydratase | ASD34_18650 | Not Available | Negative | 4999502 - 5000326 | 29932.3 |
| gntr family transcriptional regulator | ASD34_18655 | Not Available | Positive | 5000437 - 5001297 | 30810.6 |
| abc transporter substrate-binding protein | ASD34_18660 | Not Available | Positive | 5001421 - 5002410 | 34600.1 |
| 5-dehydro-4-deoxyglucarate dehydratase | ASD34_18665 | Not Available | Positive | 5002463 - 5003374 | 32531.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
