Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ASD34_18420 | Not Available | Positive | 4956226 - 4957200 | 34387.1 |
| short-chain dehydrogenase | ASD34_18425 | Not Available | Negative | 4957208 - 4957993 | 26498.7 |
| isochorismatase | ASD34_18430 | Not Available | Negative | 4957990 - 4958583 | 20840.8 |
| aromatic-ring-hydroxylating dioxygenase | ASD34_18435 | Not Available | Negative | 4958580 - 4959068 | 19128.5 |
| ribosomal subunit interface protein | ASD34_18440 | Not Available | Negative | 4959065 - 4960432 | 50247.4 |
| ferredoxin | ASD34_18445 | Not Available | Negative | 4960456 - 4961421 | 33783.5 |
| carboxymethylenebutenolidase | ASD34_18450 | Not Available | Negative | 4961418 - 4962680 | 45671.7 |
| abc transporter substrate-binding protein | ASD34_18455 | Not Available | Positive | 4962868 - 4964064 | 42303.8 |
| arac family transcriptional regulator | ASD34_18460 | Not Available | Negative | 4964081 - 4965103 | 38672.1 |
| nadph-dependent fmn reductase | ASD34_18465 | Not Available | Negative | 4965252 - 4965971 | 26993.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
