Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | ASD34_18370 | Not Available | Negative | 4947034 - 4947861 | 30158.3 |
| abc transporter substrate-binding protein | ASD34_18375 | Not Available | Positive | 4947975 - 4948961 | 34144.7 |
| phthalate 4,5-dioxygenase | ASD34_18380 | Not Available | Positive | 4948983 - 4950317 | 51139.3 |
| 4,5-dioxygenase | ASD34_18385 | Not Available | Negative | 4950346 - 4950693 | 13211.7 |
| hypothetical protein | ASD34_18390 | Not Available | Negative | 4950701 - 4951318 | 23590.7 |
| methyltransferase type 11 | ASD34_18395 | Not Available | Negative | 4951315 - 4952271 | 34975.8 |
| thiol-disulfide oxidoreductase | ASD34_18400 | Not Available | Negative | 4952321 - 4952752 | 15221.6 |
| marr family transcriptional regulator | ASD34_18405 | Not Available | Negative | 4952820 - 4953413 | 22305.7 |
| radical sam protein | ASD34_18410 | Not Available | Positive | 4953548 - 4954642 | 40679.7 |
| 6-phosphogluconate dehydrogenase | ASD34_18415 | Not Available | Negative | 4954655 - 4956079 | 51657.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
