Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASD34_18320 | Not Available | Negative | 4938402 - 4938743 | 12901.5 |
| thioredoxin | ASD34_18325 | Not Available | Positive | 4938842 - 4939225 | 13662.5 |
| epimerase | ASD34_18330 | Not Available | Positive | 4939247 - 4939912 | 24306.9 |
| alpha/beta hydrolase | ASD34_18335 | Not Available | Negative | 4939932 - 4940738 | 28476.3 |
| o-acetylhomoserine aminocarboxypropyltransferase | ASD34_18340 | Not Available | Negative | 4940740 - 4942050 | 46358.2 |
| hypothetical protein | ASD34_18345 | Not Available | Positive | 4942206 - 4942664 | 16994.7 |
| abc transporter substrate-binding protein | ASD34_18350 | Not Available | Negative | 4942819 - 4943802 | 34259.8 |
| adenosine deaminase | ASD34_18355 | Not Available | Negative | 4943811 - 4944989 | 44001.4 |
| lysr family transcriptional regulator | ASD34_18360 | Not Available | Positive | 4945012 - 4945914 | 32704.9 |
| hypothetical protein | ASD34_18365 | Not Available | Negative | 4945877 - 4946536 | 25148.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
