Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease vii | ASD34_18160 | Not Available | Negative | 4909584 - 4909850 | 9321.04 |
| rieske (2fe-2s) protein | ASD34_18165 | Not Available | Positive | 4910121 - 4911266 | 43455.3 |
| hypothetical protein | ASD34_18170 | Not Available | Positive | 4911328 - 4912260 | 32691.5 |
| 3-mercaptopyruvate sulfurtransferase | ASD34_18175 | Not Available | Positive | 4912317 - 4913225 | 32287.1 |
| metal abc transporter substrate-binding protein | ASD34_18180 | Not Available | Positive | 4913225 - 4913812 | 20445.4 |
| methionine abc transporter atp-binding protein | ASD34_18185 | Not Available | Positive | 4913817 - 4914566 | 27110.6 |
| peptide abc transporter permease | ASD34_18190 | Not Available | Positive | 4914563 - 4915825 | 44958.3 |
| hypothetical protein | ASD34_18195 | Not Available | Positive | 4915828 - 4916454 | 21995.5 |
| hypothetical protein | ASD34_18205 | Not Available | Negative | 4918382 - 4918762 | 14002.3 |
| peptidase m20 | ASD34_18210 | Not Available | Negative | 4918830 - 4920101 | 44272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
