Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | ASD34_02245 | Not Available | Positive | 473347 - 473583 | 8770.46 |
| hypothetical protein | ASD34_02250 | Not Available | Negative | 473948 - 474262 | 11324.2 |
| dna helicase | ASD34_02255 | Not Available | Positive | 474888 - 475622 | 26787.2 |
| hypothetical protein | ASD34_02260 | Not Available | Negative | 475860 - 476072 | 7842.46 |
| mbl fold metallo-hydrolase | ASD34_02265 | Not Available | Negative | 476328 - 477380 | 38779.2 |
| 3-oxoacyl-acp reductase | ASD34_02270 | Not Available | Negative | 477390 - 478223 | 28828.8 |
| long-chain fatty acid--coa ligase | ASD34_02275 | Not Available | Negative | 478240 - 479844 | 58036.5 |
| carboxymuconolactone decarboxylase | ASD34_02280 | Not Available | Negative | 479856 - 480449 | 21711.1 |
| abc transporter atp-binding protein | ASD34_02285 | Not Available | Negative | 480490 - 481197 | 25440.2 |
| abc transporter atp-binding protein | ASD34_02290 | Not Available | Negative | 481194 - 481946 | 27329.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
