Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon monoxide dehydrogenase | ASD34_18010 | Not Available | Negative | 4874373 - 4874870 | 17332.0 |
| histidine kinase | ASD34_18015 | Not Available | Positive | 4875068 - 4876222 | 41239.2 |
| polyketide cyclase | ASD34_18020 | Not Available | Negative | 4876248 - 4876625 | 13394.7 |
| microcystin degradation protein mlrc | ASD34_18025 | Not Available | Negative | 4876717 - 4878210 | 52247.6 |
| zn-dependent hydrolase | ASD34_18030 | Not Available | Negative | 4878207 - 4879487 | 45201.8 |
| abc transporter atp-binding protein | ASD34_18035 | Not Available | Negative | 4879515 - 4880231 | 25660.4 |
| abc transporter atp-binding protein | ASD34_18040 | Not Available | Negative | 4880228 - 4880995 | 27493.4 |
| abc transporter permease | ASD34_18045 | Not Available | Negative | 4880992 - 4881951 | 34105.8 |
| abc transporter permease | ASD34_18050 | Not Available | Negative | 4881959 - 4882819 | 30463.6 |
| branched-chain amino acid abc transporter substrate-binding protein | ASD34_18055 | Not Available | Negative | 4882914 - 4884119 | 43069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
