Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4800476 - 4800549 | Not Available |
| hypothetical protein | ASD34_17670 | Not Available | Negative | 4800601 - 4800825 | 8026.01 |
| hypothetical protein | ASD34_17675 | Not Available | Negative | 4800961 - 4801263 | 10581.3 |
| permease | ASD34_17680 | Not Available | Negative | 4801375 - 4802151 | 27966.4 |
| biotin carboxylase | ASD34_17685 | Not Available | Negative | 4802135 - 4803295 | 41431.7 |
| hypothetical protein | ASD34_17690 | Not Available | Negative | 4803327 - 4803626 | 10337.7 |
| atp-dependent dna ligase | ASD34_17695 | Not Available | Positive | 4803884 - 4806442 | 93560.0 |
| dna-binding protein | ASD34_17700 | Not Available | Positive | 4806476 - 4807399 | 33875.1 |
| lysr family transcriptional regulator | ASD34_17705 | Not Available | Negative | 4807402 - 4808310 | 32910.9 |
| lipase | ASD34_17710 | Not Available | Positive | 4808423 - 4809691 | 44230.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
