Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase | ASD34_17610 | Not Available | Negative | 4785883 - 4789218 | 125491.0 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | ASD34_17615 | Not Available | Negative | 4789240 - 4791297 | 77507.4 |
| glycogen branching protein | ASD34_17620 | Not Available | Negative | 4791294 - 4793201 | 71241.1 |
| hypothetical protein | ASD34_17630 | Not Available | Negative | 4793790 - 4794320 | 19123.9 |
| glycoside hydrolase | ASD34_17635 | Not Available | Positive | 4794472 - 4795647 | 44185.8 |
| hypothetical protein | ASD34_17640 | Not Available | Negative | 4795651 - 4795869 | 7700.37 |
| aldehyde oxidoreductase | ASD34_17645 | Not Available | Positive | 4796111 - 4796755 | 22183.7 |
| molybdopterin dehydrogenase | ASD34_17650 | Not Available | Positive | 4796752 - 4797702 | 33186.9 |
| xanthine dehydrogenase | ASD34_17655 | Not Available | Positive | 4797705 - 4799915 | 78009.7 |
| hypothetical protein | ASD34_17660 | Not Available | Negative | 4799948 - 4800229 | 10662.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
