Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASD34_17260 | Not Available | Positive | 4699473 - 4700426 | 34144.4 |
| amine oxidase | ASD34_17265 | Not Available | Positive | 4700546 - 4701628 | 39300.8 |
| glutamyl-q trna(asp) ligase | ASD34_17270 | Not Available | Positive | 4701635 - 4702540 | 32884.9 |
| trna (guanine-n7)-methyltransferase | ASD34_17275 | Not Available | Positive | 4702537 - 4703319 | 28509.1 |
| hypothetical protein | ASD34_17280 | Not Available | Negative | 4703341 - 4703868 | 18770.9 |
| abc transporter substrate-binding protein | ASD34_17285 | Not Available | Positive | 4703986 - 4705155 | 40465.9 |
| crp/fnr family transcriptional regulator | ASD34_17290 | Not Available | Negative | 4705162 - 4705884 | 25825.6 |
| phosphohydrolase | ASD34_17295 | Not Available | Positive | 4706016 - 4706606 | 22476.6 |
| aldolase | ASD34_17300 | Not Available | Positive | 4706630 - 4707397 | 28019.6 |
| bile acid:sodium symporter | ASD34_17305 | Not Available | Positive | 4707505 - 4708383 | 30853.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
