Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root473 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927571 bp
Thymine Count
919826 bp
Guanine Count
1948589 bp
Cytosine Count
1948768 bp
Genome Length
5749203 bp
Protein-coding Genes
5226 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | ASD34_17010 | Not Available | Positive | 4646111 - 4646476 | 12829.6 |
| hypothetical protein | ASD34_17015 | Not Available | Negative | 4646503 - 4647234 | 27490.3 |
| hypothetical protein | ASD34_17020 | Not Available | Negative | 4647574 - 4648599 | 38008.6 |
| hypothetical protein | ASD34_17025 | Not Available | Positive | 4649083 - 4649610 | 19395.3 |
| crp/fnr family transcriptional regulator | ASD34_17030 | Not Available | Positive | 4649769 - 4650479 | 25945.1 |
| hypothetical protein | ASD34_17035 | Not Available | Positive | 4650586 - 4651275 | 25496.5 |
| hypothetical protein | ASD34_17040 | Not Available | Negative | 4651911 - 4652480 | 19520.4 |
| thioredoxin | ASD34_17045 | Not Available | Negative | 4652521 - 4653279 | 29041.1 |
| glutamine cyclotransferase | ASD34_17050 | Not Available | Negative | 4653308 - 4653931 | 22099.7 |
| dna-binding protein | ASD34_17055 | Not Available | Negative | 4654049 - 4655269 | 42857.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
